CDS

Accession Number TCMCG007C52335
gbkey CDS
Protein Id XP_009112024.2
Location join(4223399..4223801,4223908..4225184)
Gene LOC103837417
GeneID 103837417
Organism Brassica rapa

Protein

Length 559aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009113776.3
Definition U-box domain-containing protein 41 isoform X3 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category O
Description RING-type E3 ubiquitin transferase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K08332        [VIEW IN KEGG]
ko:K22499        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04934        [VIEW IN KEGG]
map04934        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005102        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0033612        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0070696        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTGGAACTAAGAAGAAATGGTTCTCCTTCCACCAACGATCAGCTTCCGCCACCACTACAACTGTACCGCAACACAAACACAACGAAACTCCACCTGAGTTTCTCTGTCCCATAACAGGATTCCTCATGTCCGATCCTGTAGTTGTCCCATCTGGTCAAACCTTCGAGCGTCTCTCCGTTCAAGTCTGTCGTAACGTAGGATACGTACCGGATCTTCTCGATGGAACCCGACCCGATTTCTCCACCGTCATCCCCAACCTCGCCATGAAGTCCACCATCTTCAGCTGGTGCGACAGGAATAAAGTTGACCATCCTCGTCCTCCTGACTCTGCCTACGTTGAAAACGTGGTTCGTGCCCGCATGAATATAGATCCCCAGAGCCGGATTGGGACACAGCCAAGTTTGGGTGATCCGGAGCCTGAGATTCTCCCTCCTGTGGCTGAGAATTCACCTTCAGATTACTATGCTGTAATGGAGGCGATACGAGCACGTTCCAAGAACTCAGTGTCGCCGTCTCCGTCGCCGACAACATCACTTGAGTCAGTTACGGTCGGGCAGAGTCCATACCACCCGACACGAGCCGTTAGTATGTTCTCTTCTTCCTCCACTACTTCATCAGGAGTTTATATCGGAGCTGAAAGTCCGAACGCTATCTCATTCTCTTCCTCCGACTACTCTTCTTCTTCCCCGATGTCGCCGGAAGAAGAAGAGATCTTCAACAAACTAAGAACCGCCGACATTTTCGACCACGAGCAAGGTCTGATCCTGCTAAGGAAGATGACAAGAACAAGCGAGGAACTTCGTGTGTCTCTCTGTACAGACCGTATCCTCTCTTTCCTTCGATCACTTCTTGTTTCACGTTACAACCTCGTTCAGACAAACGCGGCAGCTTCTCTAGTCAACCTCTCGCTCGAGAAACAAAACAAAGTGAAGATCGTACGTTCAGGCTTCGTTCCCTTATTAATCGACGTGCTTAAATCTGGAACAACGGAGGCTCAGGAGCACGTCGCCGGAGTTTTGTTTAGTTTAGCGTTGGAGGATGAGAACAAAATGGTGATCGGAGTTCTCGGCGCGGTGGAGCCTCTCCTCCATGCGTTACGTTCTTCGGATAGCGAAAGAGCGCGTCAAGACGCGTCTCTTGCGTTGTATCACTTATCTTTGGTTCCTAGTAACAGGACTAGGCTGGTTAGAGCAGGTGCGGTGGCGACTCTGCTTTCGATGGTTAGGTCCGGTGAGTCCACGAGTAGGATACTTTTGGTGCTTTGTAACCTTGCGGCGTGTCCTGACGGAAAAGGAGCAATGCTGGAGGGTAACGCGGTGGCCATTCTGGTGGGGAAGCTAAGAGAAGGTGGTGGAGAAGATTCTGAGGCGGCGCGTGAGAATTGTGTGGCGGTTTTGTTGACGCTTTGTCAAGGGAATTTGAGGTTTAGGGGGTTGGCGAGTGAGGTGGGAGCTGAGGAAGTGTTGAAGGAAGTGGAGGAGAGAGGGAACGGACGGGTGAAGGAGAATGCGGCGAAGATTTTGCAGGTGATGAGAGGAGGAGGCGGTGGAGGTAGTACGTTTGGAGAAAATGGGGAGGCGCGTGAGTGGAACCGTATGCTTGAAGGGACTGGGTTGAGTCGAACTCAGTTTCAAGGAGGACAAAACGGGGGTTTCGCCTGTTCTTCCCAGTTCTAG
Protein:  
MGGTKKKWFSFHQRSASATTTTVPQHKHNETPPEFLCPITGFLMSDPVVVPSGQTFERLSVQVCRNVGYVPDLLDGTRPDFSTVIPNLAMKSTIFSWCDRNKVDHPRPPDSAYVENVVRARMNIDPQSRIGTQPSLGDPEPEILPPVAENSPSDYYAVMEAIRARSKNSVSPSPSPTTSLESVTVGQSPYHPTRAVSMFSSSSTTSSGVYIGAESPNAISFSSSDYSSSSPMSPEEEEIFNKLRTADIFDHEQGLILLRKMTRTSEELRVSLCTDRILSFLRSLLVSRYNLVQTNAAASLVNLSLEKQNKVKIVRSGFVPLLIDVLKSGTTEAQEHVAGVLFSLALEDENKMVIGVLGAVEPLLHALRSSDSERARQDASLALYHLSLVPSNRTRLVRAGAVATLLSMVRSGESTSRILLVLCNLAACPDGKGAMLEGNAVAILVGKLREGGGEDSEAARENCVAVLLTLCQGNLRFRGLASEVGAEEVLKEVEERGNGRVKENAAKILQVMRGGGGGGSTFGENGEAREWNRMLEGTGLSRTQFQGGQNGGFACSSQF